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Cheap flights from Santorini (Thira) to Naxos

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      Compare Santorini (Thira) to Naxos flight deals

      Find the cheapest month or even day of the year to fly to Naxos

      Book the best Naxos fare with no extra fees

      Flight deals from Santorini (Thira) to Naxos

      Looking for a cheap last-minute deal or the best round-trip flight from Santorini (Thira) Airport to Naxos Airport? If you want to travel next month, round-trip fares start from $190. Find the lowest prices on one-way and round-trip tickets right here.
      Naxos.$181 per passenger.Departing Wed, Nov 11, returning Sun, Nov 15.Round-trip flight with Aegean Airlines and SKY express.Outbound indirect flight with Aegean Airlines, departing from Santorini (Thira) on Wed, Nov 11, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Sun, Nov 15, arriving in Santorini (Thira).Price includes taxes and charges.From $181, select.
      Naxos.$190 per passenger.Departing Sat, Oct 24, returning Sat, Oct 31.Round-trip flight with Ryanair and SKY express.Outbound indirect flight with Ryanair, departing from Santorini (Thira) on Sat, Oct 24, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Sat, Oct 31, arriving in Santorini (Thira).Price includes taxes and charges.From $190, select.
      Naxos.$269 per passenger.Departing Sun, Jun 6, returning Sat, Jun 12.Round-trip flight with Aegean Airlines.Outbound indirect flight with Aegean Airlines, departing from Santorini (Thira) on Sun, Jun 6, arriving in Naxos.Inbound indirect flight with Aegean Airlines, departing from Naxos on Sat, Jun 12, arriving in Santorini (Thira).Price includes taxes and charges.From $269, select.
      Naxos.$270 per passenger.Departing Fri, Oct 30, returning Sun, Nov 1.Round-trip flight with SKY express.Outbound indirect flight with SKY express, departing from Santorini (Thira) on Fri, Oct 30, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Sun, Nov 1, arriving in Santorini (Thira).Price includes taxes and charges.From $270, select.
      Naxos.$405 per passenger.Departing Mon, Sep 7, returning Mon, Sep 21.Round-trip flight with Ryanair and SKY express.Outbound indirect flight with Ryanair, departing from Santorini (Thira) on Mon, Sep 7, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Mon, Sep 21, arriving in Santorini (Thira).Price includes taxes and charges.From $405, select.
      Naxos.$455 per passenger.Departing Fri, Sep 25, returning Tue, Oct 13.Round-trip flight with SKY express.Outbound indirect flight with SKY express, departing from Santorini (Thira) on Fri, Sep 25, arriving in Naxos.Inbound indirect flight with SKY express, departing from Naxos on Tue, Oct 13, arriving in Santorini (Thira).Price includes taxes and charges.From $455, select.

      Find the cheapest month to fly from Santorini (Thira) to Naxos

      We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Santorini (Thira) to Naxos flights are currently cheapest in November.
      Sep
      from $405
      Oct
      from $190
      Nov
      from $181
      Dec
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      Jan
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      Feb
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      Mar
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      Apr
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      May
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      Jun
      from $269
      Jul
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      Aug
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      Santorini (Thira) to Naxos: Alternative routes

      Compare routes from Santorini (Thira) to Naxos below. You may find an airport to fly into that's cheaper, faster, or easier than Naxos.

      Naxos

      1km from central Naxos
      ClosestCheapest
      from $181
      Search flights

      Paros

      25km from central Naxos
      from $186
      Search flights

      Mykonos

      37km from central Naxos
      from $182
      Search flights

      Santorini (Thira) to Naxos: Flight information

      The things to know before you go.
      Cheapest flight found$181
      Cheapest month to flyNovember

      Finding cheap flights from Santorini (Thira) to Naxos: Frequently asked questions

      The best price we found for a round-trip flight from Santorini (Thira) to Naxos is $181. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.
      Currently, there are no airlines that fly direct from Santorini (Thira) to Naxos. But we found flights with one or more stops from $181.
      There are no flights flying from Santorini (Thira) to Naxos, as of September 2026.
      The cheapest month to fly from Santorini (Thira) to Naxos is usually November.
      After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Santorini (Thira) Airport to Naxos Airport on Wednesday, November 11, 2026.
      No airlines currently offer direct flights between Santorini (Thira) Airport and Naxos Airport. Most routes have one or more stops.
      We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to Naxos but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.

      We crunched all the numbers in our flight calendar, and it looks like the cheapest time to book a flight to Naxos is around 40 days in advance, so don’t leave your flight to the last minute.

      Currently, Aegean Airlines offers the cheapest flight tickets to Naxos.

      Flying from Santorini International Airport (JTR) to Naxos Airport (JNX): what you need to know

      • For a stress-free journey, arrive at the airport two hours ahead of international flights and an hour before domestic departures. This will give you plenty of time to board your JTR to JNX flight.

      • Be prepared for longer queues in popular months like July. Arriving up to four hours in advance for international flights and two hours for a domestic departure is a good idea.

      • If you want to explore a new city along the way, search for a flight with a stopover. To see your options for tickets from Santorini International Airport to Naxos Airport, uncheck 'Direct flights only.' Eleftherios Venizelos International Airport is a popular stop between JTR and JNX.

      How to find the cheapest flights from Santorini International Airport (JTR) to Naxos Airport (JNX)

      • $97 is currently the best price for a one-way Santorini International Airport to Naxos Airport flight. Return flights start from $181. These fares may change depending on demand and availability.

      • It's usually smart to book in advance if you're hoping to get cheap tickets from JTR to JNX. That's because flight prices are based on demand, which tends to increase closer to the date of departure.

      • The 'Whole month' search tool shows you the cheapest flights from Santorini International Airport to Naxos Airport across every month. It's a good way to snap up a bargain if your plans aren't set in stone.

      • You won't have to check every day to find out if fares have gone down when you set up a Price Alert. We'll send you an update as soon as there's a new deal on cheap flights from JTR to JNX.

      • Tailor your flights with filters. Choose your departure and arrival times, airlines and total journey duration. You can also sort your results by 'Fastest,' 'Best' or 'Cheapest' flights from Santorini International Airport to Naxos Airport.

      Handy information about Santorini International Airport (JTR)

      • Santorini International Airport gets top marks for its on-time performance. 92.74% of flights that depart JTR arrive at their destination without delay.

      • To get to Santorini International Airport from central Santorini (Thira), it'll take around 10 minutes if you're planning to drive. This depends on traffic, however. It's approximately 5 kilometers from the airport to the city center.

      • Taking an early flight from Santorini International Airport to Naxos Airport? Avoid rushing to the airport (and get some extra shut-eye) by picking one of these hotels close to JTR:

      Arriving at Naxos Airport (JNX)

      • The last thing you want is a lengthy journey to your hotel if you're landing late on a Santorini International Airport to Naxos Airport flight. Book one of these accommodation options near JNX instead:

      • Pick up a Naxos Airport rental car and discover Naxos and beyond with your own wheels. IDEA MOBILITY, Carwiz and Avance are top providers to choose from here.

      • For the lowest price, book your vehicle from Naxos Airport about one week before you set off.

      Getting from Naxos Airport (JNX) to central Naxos

      • Naxos Airport is roughly 3 kilometers from central Naxos. The drive time takes about 5 minutes.

      • If you're using public transport, expect a journey of about 40 minutes.

      When to fly to Naxos Airport (JNX)

      • It's time to pick your travel dates for your flight from Santorini International Airport to Naxos Airport. July is the most popular month to visit Naxos. If you're after a more low-key vibe, go in January.

      • The warmest month in Naxos is August, with temperatures ranging between 23ºC (73ºF) and 28ºC (82ºF). Book your flights from Santorini International Airport to Naxos Airport in this month if you like this kind of weather.

      • If you'd rather travel in cooler conditions, search for a cheap ticket from JTR to JNX in January. Average temperatures are between 9ºC (48ºF) and 15ºC (59ºF) then.

      Explore more of Greece

      • You've visited Naxos, now it's time to explore more of Greece. Travel around 177 kilometers north-west to Athens to check off its leading attractions. From Museum of the Center for the Acropolis Studies to Acropolis of Athens and The Parthenon, you've got a jam-packed schedule ahead.

      • If you're ready to explore another major destination in Greece, consider Thessaloniki, roughly 451 kilometers north-west of Naxos. Arch of Galerius, Aristotelous Square and Museum of Byzantine Culture are key reasons to visit.

      More travel options

      Plan the rest of your trip from Santorini (Thira) to Naxos

      Prices shown on this page are estimated lowest prices only. Found in the last 12 days.