Cheap flights from Kota Kinabalu to Tokyo

Compare Kota Kinabalu to Tokyo flight deals

Find the cheapest month or even day of the year to fly to Tokyo

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Flight deals from Kota Kinabalu to Tokyo

Looking for a cheap last-minute deal or the best round-trip flight from Kota Kinabalu Airport to Tokyo? If you want to travel next month, round-trip fares start from $402. Find the lowest prices on one-way and round-trip tickets right here.

Tokyo.$338 per passenger.Departing Mon, Jul 6, returning Thu, Jul 9.Round-trip flight with Scoot and AirAsia X.Outbound indirect flight with Scoot, departing from Kota Kinabalu on Mon, Jul 6, arriving in Tokyo Haneda.Inbound indirect flight with AirAsia X, departing from Tokyo Haneda on Thu, Jul 9, arriving in Kota Kinabalu.Price includes taxes and charges.From $338, select.

Tokyo.$381 per passenger.Departing Fri, Oct 9, returning Mon, Oct 12.Round-trip flight with AirAsia and Scoot.Outbound indirect flight with AirAsia, departing from Kota Kinabalu on Fri, Oct 9, arriving in Tokyo Haneda.Inbound indirect flight with Scoot, departing from Tokyo Narita on Mon, Oct 12, arriving in Kota Kinabalu.Price includes taxes and charges.From $381, select.

Tokyo.$400 per passenger.Departing Fri, Sep 18, returning Wed, Sep 23.Round-trip flight with HK Express and Scoot.Outbound indirect flight with HK Express, departing from Kota Kinabalu on Fri, Sep 18, arriving in Tokyo Narita.Inbound indirect flight with Scoot, departing from Tokyo Narita on Wed, Sep 23, arriving in Kota Kinabalu.Price includes taxes and charges.From $400, select.

Tokyo.$402 per passenger.Departing Tue, Jun 9, returning Tue, Jun 16.Round-trip flight with Scoot.Outbound indirect flight with Scoot, departing from Kota Kinabalu on Tue, Jun 9, arriving in Tokyo Haneda.Inbound indirect flight with Scoot, departing from Tokyo Narita on Tue, Jun 16, arriving in Kota Kinabalu.Price includes taxes and charges.From $402, select.

Tokyo.$406 per passenger.Departing Sat, Jun 27, returning Wed, Jul 1.Round-trip flight with Scoot.Outbound indirect flight with Scoot, departing from Kota Kinabalu on Sat, Jun 27, arriving in Tokyo Haneda.Inbound indirect flight with Scoot, departing from Tokyo Narita on Wed, Jul 1, arriving in Kota Kinabalu.Price includes taxes and charges.From $406, select.

Tokyo.$409 per passenger.Departing Mon, Jan 11, returning Mon, Jan 18.Round-trip flight with Scoot.Outbound indirect flight with Scoot, departing from Kota Kinabalu on Mon, Jan 11, arriving in Tokyo Narita.Inbound indirect flight with Scoot, departing from Tokyo Narita on Mon, Jan 18, arriving in Kota Kinabalu.Price includes taxes and charges.From $409, select.

Tokyo.$426 per passenger.Departing Sun, Aug 30, returning Sat, Sep 5.Round-trip flight with Scoot.Outbound indirect flight with Scoot, departing from Kota Kinabalu on Sun, Aug 30, arriving in Tokyo Narita.Inbound indirect flight with Scoot, departing from Tokyo Narita on Sat, Sep 5, arriving in Kota Kinabalu.Price includes taxes and charges.From $426, select.

Tokyo.$428 per passenger.Departing Thu, Sep 24, returning Thu, Oct 1.Round-trip flight with China Eastern.Outbound indirect flight with China Eastern, departing from Kota Kinabalu on Thu, Sep 24, arriving in Tokyo Haneda.Inbound indirect flight with China Eastern, departing from Tokyo Haneda on Thu, Oct 1, arriving in Kota Kinabalu.Price includes taxes and charges.From $428, select.

Tokyo.$428 per passenger.Departing Wed, May 13, returning Fri, May 22.Round-trip flight with AirAsia and Scoot.Outbound indirect flight with AirAsia, departing from Kota Kinabalu on Wed, May 13, arriving in Tokyo Narita.Inbound indirect flight with Scoot, departing from Tokyo Narita on Fri, May 22, arriving in Kota Kinabalu.Price includes taxes and charges.From $428, select.

Tokyo.$438 per passenger.Departing Wed, Nov 11, returning Tue, Nov 17.Round-trip flight with HK Express and Scoot.Outbound indirect flight with HK Express, departing from Kota Kinabalu on Wed, Nov 11, arriving in Tokyo Narita.Inbound indirect flight with Scoot, departing from Tokyo Narita on Tue, Nov 17, arriving in Kota Kinabalu.Price includes taxes and charges.From $438, select.

Tokyo.$439 per passenger.Departing Fri, Jul 31, returning Mon, Aug 3.Round-trip flight with AirAsia and Scoot.Outbound indirect flight with AirAsia, departing from Kota Kinabalu on Fri, Jul 31, arriving in Tokyo Haneda.Inbound indirect flight with Scoot, departing from Tokyo Haneda on Mon, Aug 3, arriving in Kota Kinabalu.Price includes taxes and charges.From $439, select.

Tokyo.$440 per passenger.Departing Tue, Oct 27, returning Mon, Nov 2.Round-trip flight with HK Express and Scoot.Outbound indirect flight with HK Express, departing from Kota Kinabalu on Tue, Oct 27, arriving in Tokyo Narita.Inbound indirect flight with Scoot, departing from Tokyo Narita on Mon, Nov 2, arriving in Kota Kinabalu.Price includes taxes and charges.From $440, select.

Tokyo.$443 per passenger.Departing Sat, May 30, returning Tue, Jun 9.Round-trip flight with HK Express and Scoot.Outbound indirect flight with HK Express, departing from Kota Kinabalu on Sat, May 30, arriving in Tokyo Narita.Inbound indirect flight with Scoot, departing from Tokyo Narita on Tue, Jun 9, arriving in Kota Kinabalu.Price includes taxes and charges.From $443, select.

Tokyo.$445 per passenger.Departing Mon, Aug 3, returning Thu, Aug 13.Round-trip flight with AirAsia and HK Express.Outbound indirect flight with AirAsia, departing from Kota Kinabalu on Mon, Aug 3, arriving in Tokyo Haneda.Inbound indirect flight with HK Express, departing from Tokyo Haneda on Thu, Aug 13, arriving in Kota Kinabalu.Price includes taxes and charges.From $445, select.

Tokyo.$514 per passenger.Departing Mon, Nov 9, returning Wed, Jan 20.Round-trip flight with Xiamen Airlines and Scoot.Outbound indirect flight with Xiamen Airlines, departing from Kota Kinabalu on Mon, Nov 9, arriving in Tokyo Narita.Inbound indirect flight with Scoot, departing from Tokyo Narita on Wed, Jan 20, arriving in Kota Kinabalu.Price includes taxes and charges.From $514, select.

Tokyo.$514 per passenger.Departing Tue, Nov 24, returning Tue, Dec 1.Round-trip flight with Xiamen Airlines and Scoot.Outbound indirect flight with Xiamen Airlines, departing from Kota Kinabalu on Tue, Nov 24, arriving in Tokyo Narita.Inbound indirect flight with Scoot, departing from Tokyo Narita on Tue, Dec 1, arriving in Kota Kinabalu.Price includes taxes and charges.From $514, select.

Find the cheapest month to fly from Kota Kinabalu to Tokyo

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Kota Kinabalu to Tokyo flights are currently cheapest in July.

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Alternative Kota Kinabalu to Tokyo routes

Looking for the cheapest, fastest or easiest route from Kota Kinabalu to Tokyo? You could fly into the following airports instead.

Kota Kinabalu to Tokyo: Flight information

The things to know before you go.

Cheapest flight found	$338
Cheapest month to fly	July

Finding cheap flights from Kota Kinabalu to Tokyo: Frequently asked questions

How many airports are there in Tokyo?

There are 3 airports in Tokyo: Tokyo Haneda, Tokyo Narita and Ibaraki.

How much are round-trip flights from Kota Kinabalu to Tokyo?

The best price we found for a round-trip flight from Kota Kinabalu to Tokyo is $338. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.

Which airlines fly direct from Kota Kinabalu to Tokyo?

Currently, there are no airlines that fly direct from Kota Kinabalu to Tokyo. But we found flights with one or more stops from $338.

How many flights are there a week from Kota Kinabalu to Tokyo?

There are no flights flying from Kota Kinabalu to Tokyo, as of May 2026.

When is the cheapest time to fly from Kota Kinabalu to Tokyo?

The cheapest month to fly from Kota Kinabalu to Tokyo is usually July.

What's the cheapest airport to fly to in Tokyo?

If you're flying from Kota Kinabalu Airport, the cheapest airport near Tokyo is Tokyo Haneda – which is 16.5 km away from the center of Tokyo. We've found flights to this airport from $338.

Which upcoming date is cheapest to fly from Kota Kinabalu Airport to Tokyo on?

After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Kota Kinabalu Airport to Tokyo on Monday, July 6, 2026.

Can I get a direct flight from Kota Kinabalu Airport to Tokyo?

No airlines currently offer direct flights between Kota Kinabalu Airport and Tokyo. Most routes have one or more stops.

How can I get the best flight deal from Kota Kinabalu Airport to Tokyo?

We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to Tokyo but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.

When is the best time to book flights to Tokyo?

We crunched all the numbers in our flight calendar, and it looks like the cheapest time to book a flight to Tokyo is around 40 days in advance, so don’t leave your flight to the last minute.

What’s the weather like in Tokyo?

In May, the average temperature is usually around 21°C. August is typically the warmest month in Tokyo, when it usually averages around 28°C. You can expect the least rain in February. The coldest month is February, with temperatures averaging 15°C. The rainiest month is May.

Which is the cheapest airline to fly with from Kota Kinabalu Airport to Tokyo?

Currently, Scoot offers the cheapest flight tickets to Tokyo.

Flying from Kota Kinabalu International Airport (BKI) to Tokyo: what you need to know

The timezone in Tokyo is UTC+9. The city is one hour ahead of Kota Kinabalu, where Kota Kinabalu International Airport is located.
Leave enough time to catch your BKI to Tokyo flight. As a general rule, turn up two hours before international departures and an hour ahead for domestic flights.
During popular months such as February, it's a good idea to get to the airport earlier than usual. Arrive two hours before domestic departures and four hours ahead of an international flight when you travel during peak periods in general.
You can book a direct Kota Kinabalu International Airport to Tokyo ticket. Begin your journey at BKI and arrive at Tokyo Narita International Airport (NRT).
Book your seat with Malaysia Airlines. This well-known airline operates direct flights from Kota Kinabalu International Airport to Tokyo.
We make it simple to book plane tickets from BKI to Tokyo with a stopover. To see all your options, uncheck 'Direct flights only.' Then, choose a flight offering a stop long enough to see the sights of the city of your choice. Major stopovers include:
- Shanghai Pudong International Airport (PVG)
- Seoul Incheon International Airport (ICN)
- Singapore Changi Airport (SIN)
Traveling from central Kota Kinabalu to BKI takes around 35 minutes by public transport. If you ride-share, drive or get a cab, you'll cover the 8 kilometers in 20 minutes or so, depending on traffic conditions.
Catching an early flight from Kota Kinabalu International Airport to Tokyo? Avoid rushing to the terminal (and enjoy a little extra shut-eye) by choosing one of these stays near BKI:
Of the flights that depart from Kota Kinabalu International Airport, 67% touch down on time at their destination.

How to find the cheapest flights from Kota Kinabalu International Airport (BKI) to Tokyo

$183 is currently the best price for a one-way Kota Kinabalu International Airport to Tokyo flight. Return plane tickets start at $338. These fares can change based on demand and availability.
Score cheap flights from BKI to Tokyo by booking nine months ahead. According to our research, that's the best time for finding a bargain.
February is the best month for scoring a fantastic deal on Kota Kinabalu International Airport to Tokyo tickets. If you want to travel during a different time of year, the 'Whole month' tool will give you the lowest prices for each month.
Save time looking for cheap flights from BKI to Tokyo by creating a Price Alert. You'll get an email or notification on the app when a new discounted fare appears.
Pick your preferred arrival and departure times, airlines and number of stops with our filters. Then, sort the results for your flight from Kota Kinabalu International Airport to Tokyo by 'Best,' 'Fastest' or 'Cheapest.'

Airports in Tokyo

Tokyo Haneda International Airport (HND)

The distance from Tokyo Haneda International Airport (HND) to central Tokyo is roughly 19 kilometers. It takes about 25 minutes to reach the center driving.
It'll take around 30 minutes if you're using public transport.
The last thing you need is a lengthy journey to your hotel if you're getting in late on a flight from Kota Kinabalu International Airport to Tokyo. Reserve one of these accommodation options near HND instead:
Booking your vehicle from Tokyo Haneda International Airport about three weeks in advance of your flight from BKI to Tokyo can help you lock in the best possible rate.
HND is located at 3丁目 Hanedakuko, Ota.

Tokyo Narita International Airport (NRT)

Tokyo Narita International Airport (NRT) is about 56 kilometers from central Tokyo. Once you've disembarked your flight from Kota Kinabalu International Airport to Tokyo, it'll take you around 1 hour 5 minutes to get to the heart of the city in a ride-share or cab.
If you're catching public transport, it'll take around 1 hour.
Place the 'Do not disturb' sign on your door and relax at a hotel close to NRT. Here are a few options where you can take a load off after your BKI to Tokyo flight:
Avoid paying extra. Reserving your ride four weeks ahead of your arrival at NRT can get you a lower rate.
You'll find Tokyo Narita International Airport at 成田空港第2PTB(バス), Narita.

Best time to go to Tokyo

It's time to figure out your dates for your flight from Kota Kinabalu International Airport to Tokyo. March is the most popular month to visit Tokyo. If you like a more relaxed atmosphere, go in December.
Before booking a Kota Kinabalu International Airport to Tokyo plane ticket, think about the weather you're most comfortable in. August is the warmest month in Tokyo, with temperatures ranging from 23ºC (73ºF) to 29ºC (84ºF).
If you like cooler conditions, search for a cheap ticket from BKI to Tokyo in January when temperatures average between 9ºC (48ºF) and 15ºC (59ºF).

More about Tokyo

Once you've booked your flight from Kota Kinabalu International Airport to Tokyo, find a hotel that offers the right mix of comfort and location. Make one of these accommodation options your base for exploring Tokyo:
There are so many things to discover in this city it can be hard to figure out where to start. Sensho-ji, Tokyo Skytree and Ginza Central Street are top sights which should be on any well-planned Tokyo itinerary.

Explore more of Japan

Tokyo will leave a lasting impression, but there are so many other corners of Japan you should also see. About 402 kilometers west of Tokyo, a trip to Osaka will keep you on the go. Check out popular attractions like Dotonbori, Osaka Castle and Universal Studios Japan.
Around 257 kilometers west of Tokyo, Nagoya is another favorite stop in Japan. Get a taste of what this destination has to offer at Nagoya Castle, Ninomaru Garden and Sky Promenade.