Cheap flights from Munich to San Juan

Compare Munich to San Juan flight deals

Find the cheapest month or even day of the year to fly to San Juan

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Flight deals from Munich to San Juan

Looking for a cheap last-minute deal or the best round-trip flight from Munich Airport to San Juan? If you want to travel next month, round-trip fares start from $856. Find the lowest prices on one-way and round-trip tickets right here.

San Juan.$806 per passenger.Departing Tue, Nov 3, returning Tue, Nov 17.Round-trip flight with Iberia.Outbound indirect flight with Iberia, departing from Munich on Tue, Nov 3, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Iberia, departing from San Juan Luis Munoz Marin on Tue, Nov 17, arriving in Munich.Price includes taxes and charges.From $806, select.

San Juan.$821 per passenger.Departing Tue, Sep 1, returning Tue, Oct 20.Round-trip flight with Luxair and Frontier Airlines.Outbound indirect flight with Luxair, departing from Munich on Tue, Sep 1, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Frontier Airlines, departing from San Juan Luis Munoz Marin on Tue, Oct 20, arriving in Munich.Price includes taxes and charges.From $821, select.

San Juan.$838 per passenger.Departing Sat, Sep 5, returning Wed, Sep 23.Round-trip flight with TAP Air Portugal and Frontier Airlines.Outbound indirect flight with TAP Air Portugal, departing from Munich on Sat, Sep 5, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Frontier Airlines, departing from San Juan Luis Munoz Marin on Wed, Sep 23, arriving in Munich.Price includes taxes and charges.From $838, select.

San Juan.$856 per passenger.Departing Sat, Aug 22, returning Mon, Sep 7.Round-trip flight with Iberia.Outbound indirect flight with Iberia, departing from Munich on Sat, Aug 22, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Iberia, departing from San Juan Luis Munoz Marin on Mon, Sep 7, arriving in Munich.Price includes taxes and charges.From $856, select.

San Juan.$856 per passenger.Departing Wed, Aug 19, returning Tue, Aug 25.Round-trip flight with Iberia.Outbound indirect flight with Iberia, departing from Munich on Wed, Aug 19, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Iberia, departing from San Juan Luis Munoz Marin on Tue, Aug 25, arriving in Munich.Price includes taxes and charges.From $856, select.

San Juan.$857 per passenger.Departing Wed, Oct 28, returning Thu, Nov 5.Round-trip flight with Iberia.Outbound indirect flight with Iberia, departing from Munich on Wed, Oct 28, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Iberia, departing from San Juan Luis Munoz Marin on Thu, Nov 5, arriving in Munich.Price includes taxes and charges.From $857, select.

San Juan.$862 per passenger.Departing Tue, Feb 9, returning Tue, Feb 16.Round-trip flight with Iberia.Outbound indirect flight with Iberia, departing from Munich on Tue, Feb 9, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Iberia, departing from San Juan Luis Munoz Marin on Tue, Feb 16, arriving in Munich.Price includes taxes and charges.From $862, select.

San Juan.$876 per passenger.Departing Wed, Oct 21, returning Sat, Oct 31.Round-trip flight with Iberia and Air Canada.Outbound indirect flight with Iberia, departing from Munich on Wed, Oct 21, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Air Canada, departing from San Juan Luis Munoz Marin on Sat, Oct 31, arriving in Munich.Price includes taxes and charges.From $876, select.

San Juan.$890 per passenger.Departing Sun, Jul 26, returning Wed, Aug 12.Round-trip flight with Lufthansa.Outbound indirect flight with Lufthansa, departing from Munich on Sun, Jul 26, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Lufthansa, departing from San Juan Luis Munoz Marin on Wed, Aug 12, arriving in Munich.Price includes taxes and charges.From $890, select.

San Juan.$902 per passenger.Departing Sat, Apr 10, returning Sat, Apr 24.Round-trip flight with Lufthansa.Outbound indirect flight with Lufthansa, departing from Munich on Sat, Apr 10, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Lufthansa, departing from San Juan Luis Munoz Marin on Sat, Apr 24, arriving in Munich.Price includes taxes and charges.From $902, select.

San Juan.$903 per passenger.Departing Wed, May 5, returning Wed, May 19.Round-trip flight with Lufthansa.Outbound indirect flight with Lufthansa, departing from Munich on Wed, May 5, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Lufthansa, departing from San Juan Luis Munoz Marin on Wed, May 19, arriving in Munich.Price includes taxes and charges.From $903, select.

San Juan.$903 per passenger.Departing Mon, Dec 7, returning Mon, Dec 14.Round-trip flight with Lufthansa.Outbound indirect flight with Lufthansa, departing from Munich on Mon, Dec 7, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Lufthansa, departing from San Juan Luis Munoz Marin on Mon, Dec 14, arriving in Munich.Price includes taxes and charges.From $903, select.

San Juan.$903 per passenger.Departing Mon, Mar 1, returning Fri, Mar 12.Round-trip flight with United.Outbound indirect flight with United, departing from Munich on Mon, Mar 1, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with United, departing from San Juan Luis Munoz Marin on Fri, Mar 12, arriving in Munich.Price includes taxes and charges.From $903, select.

San Juan.$903 per passenger.Departing Thu, Nov 26, returning Thu, Dec 3.Round-trip flight with United.Outbound indirect flight with United, departing from Munich on Thu, Nov 26, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with United, departing from San Juan Luis Munoz Marin on Thu, Dec 3, arriving in Munich.Price includes taxes and charges.From $903, select.

San Juan.$903 per passenger.Departing Fri, Jan 8, returning Fri, Jan 22.Round-trip flight with Lufthansa.Outbound indirect flight with Lufthansa, departing from Munich on Fri, Jan 8, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Lufthansa, departing from San Juan Luis Munoz Marin on Fri, Jan 22, arriving in Munich.Price includes taxes and charges.From $903, select.

San Juan.$903 per passenger.Departing Sat, Apr 24, returning Sat, May 15.Round-trip flight with Lufthansa.Outbound indirect flight with Lufthansa, departing from Munich on Sat, Apr 24, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Lufthansa, departing from San Juan Luis Munoz Marin on Sat, May 15, arriving in Munich.Price includes taxes and charges.From $903, select.

Find the cheapest month to fly from Munich to San Juan

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Munich to San Juan flights are currently cheapest in November.

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Alternative Munich to San Juan routes

Looking for the cheapest, fastest or easiest route from Munich to San Juan? You could fly into the following airports instead.

Munich to San Juan: Flight information

The things to know before you go.

Cheapest flight found	$806
Cheapest month to fly	November

Finding cheap flights from Munich to San Juan: Frequently asked questions

How many airports are there in San Juan?

There are 6 airports in San Juan: San Juan Isla Grande, San Juan Luis Munoz Marin, Roosevelt Roads, Ponce, Vieques, and Culebra.

How much are round-trip flights from Munich to San Juan?

The best price we found for a round-trip flight from Munich to San Juan is $806. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.

Which airlines fly direct from Munich to San Juan?

Currently, there are no airlines that fly direct from Munich to San Juan. But we found flights with one or more stops from $806.

How many flights are there a week from Munich to San Juan?

There are no flights flying from Munich to San Juan, as of July 2026.

When is the cheapest time to fly from Munich to San Juan?

The cheapest month to fly from Munich to San Juan is usually November.

What's the cheapest airport to fly to in San Juan?

If you're flying from Munich Airport, the cheapest airport near San Juan is San Juan Luis Munoz Marin – which is 11.3 km away from the center of San Juan. We've found flights to this airport from $806.

Which upcoming date is cheapest to fly from Munich Airport to San Juan on?

After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Munich Airport to San Juan on Tuesday, November 3, 2026.

Can I get a direct flight from Munich Airport to San Juan?

No airlines currently offer direct flights between Munich Airport and San Juan. Most routes have one or more stops.

How can I get the best flight deal from Munich Airport to San Juan?

We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to San Juan but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.

When is the best time to book flights to San Juan?

We crunched all the numbers in our flight calendar, and it looks like the cheapest time to book a flight to San Juan is around 40 days in advance, so don’t leave your flight to the last minute.

What’s the weather like in San Juan?

In July, the average temperature is usually around 27°C. August is typically the warmest month in San Juan, when it usually averages around 29°C. You can expect the least rain in February. The coldest month is January, with temperatures averaging 23°C. The rainiest month is September.

Which is the cheapest airline to fly with from Munich Airport to San Juan?

Currently, Iberia offers the cheapest flight tickets to San Juan.

Flying from Munich Franz Joseph Strauss Airport (MUC) to San Juan: what you need to know

San Juan is five hours behind Munich, where Munich Franz Joseph Strauss Airport is located. San Juan runs on the UTC-4 timezone.
For a relaxed start to your MUC to San Juan flight, leave enough time to check in and drop off your luggage. Turning up two hours ahead of international departures and one hour before domestic flights is the general rule.
Flying during a peak month like September? School holidays and other popular seasons can lead to longer lines at check-in and security. Be extra cautious and arrive up to four hours ahead of international flights and two hours before a domestic departure.
Think about adding a stopover to potentially find a cheaper plane ticket from MUC to San Juan. All you need to do is deselect 'Direct flights only' during your search. Break up your trip (and maybe save some cash) by stopping at one of these connection hubs:
- Newark Liberty International Airport (EWR)
- Adolfo Suarez Madrid-Barajas Airport (MAD)
- Boston Logan International Airport (BOS)
MUC is about 29 kilometers from central Munich. If you're ride-sharing, driving or catching a cab from the center, it'll take 40 minutes or so to get there, depending on the traffic. If you're using public transport, expect the trip time to be around 40 minutes.
Want a hassle-free start to your trip? Stay near MUC. Whether you're taking an early flight from Munich Franz Joseph Strauss Airport to San Juan or just don't want to be rushed, these hotels put convenience first:
When it comes to Munich Franz Joseph Strauss Airport's on-time performance, data shows 79% of flights meet their scheduled arrival time.

How to find the cheapest flights from Munich Franz Joseph Strauss Airport (MUC) to San Juan

$481 is the cheapest price we've found for a one-way Munich Franz Joseph Strauss Airport to San Juan flight. A return ticket right now is $806. Depending on when and how early you book, these fares may change.
Don't leave things to the last minute. You're more likely to find cheap flights from MUC to San Juan if you book ahead. Airlines often offer some excellent early bird rates.
Finding cheap tickets from Munich Franz Joseph Strauss Airport to San Juan is more likely if you're flexible with your dates. Use the 'Whole month' search tool to get the lowest prices across the month and score an awesome deal.
Spend less time searching for cheap flights from MUC to San Juan by setting up a Price Alert. We'll send you an email or notification through the app when a lower fare becomes available.
Find a cheap flight from Munich Franz Joseph Strauss Airport to San Juan with the help of our filters. Choose your ideal times, number of stops and airlines, then sort the results by 'Cheapest' to see the best deals.

Airports in San Juan

Luis Munoz Marin International Airport (SJU)

The distance from Luis Munoz Marin International Airport (SJU) to central San Juan is roughly 11 kilometers. It takes around 20 minutes to reach the center driving.
It'll take around 1 hour to get there by public transport.
If you're coming in on a late flight from Munich Franz Joseph Strauss Airport to San Juan, nothing beats the convenience of staying close to the terminal. Grab your suitcases from the carousel and then be showered and relaxing not long after at one of these accommodation options near SJU:
Lock in the best rate by reserving your ride from Luis Munoz Marin International Airport about two weeks in advance of your flight from MUC to San Juan.

Best time to go to San Juan

It's time to choose your trip dates for your flight from Munich Franz Joseph Strauss Airport to San Juan. March is the busiest month for a trip to San Juan. If you like a quieter vibe, go in December.
Lock in a Munich Franz Joseph Strauss Airport to San Juan plane ticket with a departure in August if you want to experience the city during its warmest month. Expect temperatures to range from 24ºC (75ºF) to 32ºC (90ºF).
February has average temperatures of between 21ºC (70ºF) and 28ºC (82ºF). Look for a cheap ticket from MUC to San Juan around that time if you like cooler conditions.

More about San Juan

Start your San Juan trip off on the right foot by choosing the perfect place to stay. Once you've booked your flight from Munich Franz Joseph Strauss Airport to San Juan, explore our selection of accommodation options including:
There are so many things to discover in this city it can be tricky to work out where to start. Esperanza Beach, Balneario El Escambron and Escambron Green are top attractions which should feature on any good San Juan itinerary.

Explore more of Puerto Rico

Aguadilla is just one of the many places in Puerto Rico waiting to be explored after you've experienced San Juan. Around 113 kilometers away to the west, its best attractions include Silla Aguadilla, Bridges Surf Beach and Playa Rompe Olas.
Around 105 kilometers west of San Juan, Isabela is another essential stop in Puerto Rico. Experience the best of this destination with a visit to Playa montones, Shore Island Beach and Guajataca Forest Reserve.